Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK
2CC0 Chain:A ((3-191))
------------------------------------------------------CNGYVGLTFDDGPSG-STQSLLNALRQNGL-RATMFNQGQYAAQNPSLVRAQVDAGMWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAV-SRLGNGQVILMHDWPA--NTLAAIPRIAQTLAGKGLCSGMISPQTGRAVA------
General information:
TITO was launched using:
RESULT:
Template:
2CC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66162 for 1653 contacts (-40.0/contact) +
2D Compatibility (PS) -20832 + (NN) -12000 + (LL) 6068
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -105626.0 ( -63.90 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2CC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CC0-query.scw
PDB file :
Tito_Scwrl_2CC0.pdb
: