Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQ--------IELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGSISGSYWYENAAETIHI--SSLKPGTARVFMSIGSEEGREKQSIQRHMLKKTKQVHQSLKEKGFTEDQLCLSIEKGAVHHHKYFCKQFINALEWLYGKNRSTL |
1JJF Chain:A ((42-261)) | --------TNSTRPARVYLPPGYSK-DKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIAD---------------GYENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPDGGKAAREKLKLLFIACGTNDSLIG---------FGQRVHEYCVANNIN---HVYWLIQGGGHDFNVWKPGLWNFLQMADEAG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98396 for 1745 contacts (-56.4/contact) +
2D Compatibility (PS) -22635 + (NN) -11904 + (LL) 2092
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -141193.0 ( -80.91 by residue)
QMean score : 0.470
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