Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKD-ITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHI----S-SNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKA-AKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPL-A--QGGTAWSKVRFLKAAAEKLTQN |
| 3TEF Chain:A ((51-329)) | ------------------------------------ETVTIEHRLGKTTLEQKPQRV-VVIGVGALDAIDSFGIEPVAVSKFDG-TPDYLAKYKSDKYPSAGSLFEPDFETIYTQKPDLIVIGPRA-SKSYDELSKIAPTIVFAAEADQGYWESTQQQWRNLGKVFAIEPAVEAKIEQVDAQFKSIMQYNQQ--HKSDAMLVMSSGGNLTTFGANSRFSS-VYKDFGFSETVPVSKESSHGDLISFEYIREHNPKTLLVVDRDKVVTKGETNIRQTFENDLVKATTAYKNGHIAYLDVNAWYIAISGVKATEQM--VADMKAS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40457 for 2247 contacts (-18.0/contact) +
2D Compatibility (PS) -29415 + (NN) -18605 + (LL) 3716
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -99111.0 ( -44.11 by residue)
QMean score : 0.472
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