Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNAVIYQPVQIEYLKKTSDLFSEQQLADSFVLIFHLKGNGYISIGTNTNPLQKKTLYVCPPNETFGFTPAADGHIDACIIRLLSYIKETGQDIFTPCTESELAKLKLMNVSHIENLAVRLQELAALWNESSQLSQLKCVIEVQSLIYDLFTASLSDQTDTHSAIEKTKHYIETHADTKITLAQLSQMAGISAKHYSESFKKWTGQSVTEFITKTRITKAKRLMAKSNCKLKEIAHQTGYQDEFYFSRIFKKYTGCSPTSYMKKRRKKIAAYGRGTMGHLIPLHHIPFAAALHPKWTSYYY-QHYSTDIPVQLSAYRFNEKWEENLYTLSQAEPDVIVSMDSISPEEQDRLNRIAEVMYLPS------EESWRTHFLQTASFLKEESEAEKWLADYDQQTTAAKKTLQHVQ-GLRFLFLRLHKQNFYLAHNRSVREVFFGDLGFSSATTADT--PSEQAISLENIANY-QADCMMLFLFKEPETIAYYQQLQQTEAWQNLSAVRDNRVYLLSLDPWNEYSACGHERIVQQTVSLLSGDCP |
| 1EFD Chain:N ((4-263)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVI------DVGLRTEPNLELLTEMKPSFMVWSAGYG-PSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNS----KDMDALMATPLWQAMPFVRAGRFQRVPAV-WFYGATLSAMHFVRVLDNAIG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127564 for 2042 contacts (-62.5/contact) +
2D Compatibility (PS) -25819 + (NN) -4468 + (LL) 20264
1D Compatibility (HY) -13600 + (ID) 2250
Total energy: -153437.0 ( -75.14 by residue)
QMean score : 0.461
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