Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGITSVLTKDNVKKIDTDIDVQERDLNVFITSASRVIAP------------LWPISTFAARNPWMGLENQPFDQVASWLKNTRDVDIYPSASMIRSAKNKGEIDEDFVEMGLQRWLDSHSYHIPRDVAERFCHAALKLDPLPSDLLSSHELEKLVSECSGLDHIENVFMQ-----------PLSSYIENQDGERLVNILDHHVIKWSKLYLDDSQAGWTMPNREEGFYRAWQ-----HLIQYDPALSKKQRERVKGWPKEAHLALQEALFALEIPE-----------SEIQTYLEGHLLSLPGWAGMMLWRSQQSSH----EHALLTEYLAVRISME---------WALIKPYLPLTNERSKKTISIAPL--------------IAAWIHW----GGLTLEEWSQMTASEQ-----NEYLSFAYSFDEKLRKKLWLEAWEQTYTDRLSQKIISKQRETGREKSALAQLAFCIDVRSEPFRRQLEKEGPFETIGIAGFFGVPIATCELG-------SKHSHASLPIIQKPQNKIKEFADEDVFKKYNQRKQAIHSLSHTFKTMKQNALSSLLLPELSGPWLTLQMAARSFVPRKAGRFIRNLREAWLRKPDTKLSLHHDATEAEIPVGFTDEEKVNYARQALKMMG--LTENIAPLVVICGHGSQSTNNPYSAALDCGACGGAAGGFNARVLAALCNLSEVREALLAEGIKIPEDTVFAAAEHN---------TTVDELHWLYVPELSEAAQEAFEQIEAVMPKVRHHVNAE----------------RLAQLPNFQSKLKNPKAEANRFAEDWSEI---------RPEWGLARNAAFIIGKRELTQDC--------DLEGRAFLHNYDWKQDESGELLANIIV----------GPGTVAQWINLQYYASTVAPHYYGSGNKATQTVTAGLG--------VMQGNASDLLAGLPWQSVMESDHEAYHSPLR---------LLILIQAPREYVERLLNHDSAFLQKVQNGWVRLASLDPE---GCWESW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1FO4 Chain:A ((3-1332)) | -ADELVFFVNGKKVVEKNADP-ETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQD--KIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQ----CGFCTPGIVMSMYTLLRNQPEPTVEEIEDA--FQGNLCRCTGYRPILQGFRTFAKSPSLFNPEEFMPLDPTQEPIFPPELLRLKDVPPKQLRFEGERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVSRGTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGSMQVKELALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLGKDSKLDPTYTSATLLFQKHPPANIQLFQE--VPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTS-TRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETGLFNDETV-FAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLPAIITIEDAIKNNSFYGSELKIEKGDLKKGFSEADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFYRTPNLGYSFETNSGNAFHYFTYGVACSEVEIDCLTGDHKNLRTDIVMDVGSSLNPAIDIGQVEGAFVQGLGLFTLEELHYSPEGSLHTRGPSTYKIPAFGSIPTEFRVSLLRDCPNKKAIYASKAVGEPPLFLGASVFFAIKDAIRAARAQHTNNNTKELFRLDSPATPEKIRNACVDKFTTLCVTGAPGNCKPWSLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FO4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62801 for 6525 contacts (-9.6/contact) +
2D Compatibility (PS) -87624 + (NN) 15759 + (LL) 1296
1D Compatibility (HY) -7200 + (ID) 4450
Total energy: -145020.0 ( -22.23 by residue)
QMean score : 0.118
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