Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MKKSKGSIESEISKSITQWEKDYL-------GRGSVSVKTDILRDMIIVNL-------KGILTPAEYVVCGS---KEGMLSIKQTRSEL-----------------VESGIEGLKDIILKITGEKVK-SFHTDLSSRTGERVMVFKLCNDLEKNLEKIL
1BS4 Chain:A ((1-168))
SVLQVLHIPDERLRKVAKPVE-EVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA--
General information:
TITO was launched using:
RESULT:
Template:
1BS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9888 for 778 contacts (-12.7/contact) +
2D Compatibility (PS) -12578 + (NN) 2658 + (LL) 352
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -27106.0 ( -34.84 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_1BS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS4-query.scw
PDB file :
Tito_Scwrl_1BS4.pdb
: