Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSNGDKLSLSVQNLANTNE--ITIVQAIGELKKSGK-DAIPVLVEALKEE-GSLCNIAAAVLGEFGEDASEAAEELSCLLKS--HAEDTRMAAAISLMRIGKP-SLPFVIKIAQESEGQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGKLIAFQLKDKED
4D4Z Chain:A ((10-133))
-----QEVDAIGQTLVDPKQPLQARFRALFTLRGLGGPGAIAWISQAFDDDSALLKHELAYCLGQMQDAR--AIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSDPVIEVAETCQLAVRR-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4D4Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72451 for 924 contacts (-78.4/contact) +
2D Compatibility (PS) -12378 + (NN) -7898 + (LL) 3152
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -93475.0 ( -101.16 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_4D4Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D4Z-query.scw
PDB file :
Tito_Scwrl_4D4Z.pdb
: