Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIICLKKSSKRLSTSQAVLVTDIADTGITAAAGADIIAATAAVRAKEDTTTVMAAVIVTNAGATAAVNPKKVLVPLLGQGFFYVTD
2D7U Chain:A ((39-79))
-----------------------------------------------------------TNAGHSVVINGKKYAVRQIPTGFMQ---
General information:
TITO was launched using:
RESULT:
Template:
2D7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6903 for 102 contacts (-67.7/contact) +
2D Compatibility (PS) -2672 + (NN) 725 + (LL) 5876
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -4674.0 ( -45.82 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2D7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D7U-query.scw
PDB file :
Tito_Scwrl_2D7U.pdb
: