Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSA----------YTGMKIEIYDKNRIPVSQGTEVIN---P-NTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLIMTSENNEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 1WMD Chain:A ((329-418)) | ----------------------------------------------------------TSQKATYSFTATAGKPLKISLVWSDAPASTTASVTLVNDLDLVITAPNGTQYVGNDFTSPYNDNWDGRNNVENVFI-NAPQSGTYTIEVQA------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10006 for 457 contacts (-21.9/contact) +
2D Compatibility (PS) -8316 + (NN) -3781 + (LL) 12228
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -11975.0 ( -26.20 by residue)
QMean score : 0.317
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