Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLNRQFIRTQLIAQNILSKNAPAKRENATENPAAVLEKAYSRLKSQSSTGGINQFNYSKTSVSGNSGTFSKVYQSANDRTVTDTGEETVIQSQNPYESESDIRIKILDE-----KYSRMNAINKTKSDPLGYIKDKYQNSKSPYFR-------SDLSAAERQAAYDNETEWLFKGKAQNYNLQDAV-FRNVTFH---GEVEAEN----EKVYQRGQVNQQLQVLLNRNHIHIPEGTELTFTITPIDYQVRVSGTD------DQDLIKQIEQVLQSGDNSKELFLHIM-------KSQSSDSAQFSEEAYKKYQAAREMYEVTGYHLKDLEVIDGRYVTPEGRDLMDVYKEELEKDPVQKQTASYAISYYRSELSKIAEAGYNAIPDFILSIDYSNGSLRDVGQSKSYGTGD-----TGWLEALKRQTGVNY------ |
| 4XR7 Chain:B ((225-680)) | ---MHSLLQYRSADQLFIPNN---IREDLTKKNLSILQVFPSSGKVIPSIVQ-DYFNLVPLNFNNKTTLF-KVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITGDPGRIKLSHCNFMDLLFNDDTDTVVSSTIEGQQQLDYKYLGELLFNLS-INIENSNNNTAPKEYRLEEITPQSIDDMRQIDDKFKDVLKYLISDNGDSKKSIHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIISYKELKDLIESTFRSITQH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 96498 for 2478 contacts (38.9/contact) +
2D Compatibility (PS) -39819 + (NN) 1033 + (LL) 668
1D Compatibility (HY) -14800 + (ID) 2750
Total energy: 40830.0 ( 16.48 by residue)
QMean score : 0.080
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