Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANKELKRGLG------ARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLY-VEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVGMSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGAANLISVKSFGEFEFWFAMIKIVTIILMIIAGIGIIFFGFGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILIFYIGAIFVIVTVYPWDELNSLGSPFVSTFSKI-GITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQA----PKFFKKISRNGVPLYGTIAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPGMIPWFIILISHIGFRKAKGAALDKHPFKM---PFAPFTNYLTIAFLLMVLVGMWFNDDT--RISLIVGVIFL-ALVVISYYVFGIGKRTQANLTKSEQAAE |
| 5EGS Chain:A ((40-376)) | -TKRERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA----------IWQQAREVVRFNGLEDRVHVLPGPVETV---------ELPEQVDAIVSE----------------------------------------WMGYG----------LLHES------------MLSSVLHARTKW-----------------------LKEGGLLLPASAELFIVPIS--DQMLEWRLGFWSQVKQHYGVDM-----------SCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVG------------GRFRCSCYGSAPMHGFAIWFQVTFPG-----------GEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -393384 for 2506 contacts (-157.0/contact) +
2D Compatibility (PS) -33332 + (NN) 2061 + (LL) 10408
1D Compatibility (HY) -10400 + (ID) 3250
Total energy: -427897.0 ( -170.75 by residue)
QMean score : 0.192
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