Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQYASES-------INLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSDALNLFMNSMLIIVMSVLFTLLLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKN----IFRVNTSSGQYIAIPKHFFHSEEEMNRFKEIILKNTETKKLKFKKDQH
4OWK Chain:A ((4-134))MAHVTLQSLSNNDLCLDVYGENGDKTVAGG---SVNGWSC----------------HGSWNQVWGLDKEE-------------------------RYRSRVASDRCLTVNADKTLTVEQ---CGANLAQKWYWEGDKLISRYVDGNNTRYLLNIVGGR------------------NVQVTPENEANQARWKPTLQ


General information:
TITO was launched using:
RESULT:

Template: 4OWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -15990 -26.78 -133.25
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -26.78
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.116

(partial model without unconserved sides chains):
PDB file : Tito_4OWK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OWK-query.scw
PDB file : Tito_Scwrl_4OWK.pdb: