Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIHIVGPGDSLFSIGRRYGASVDQIRGVNGLDETNIVPGQALLIPLYVYTVQPRDTLTAIAAKAFVPLERLRAANPGISPNALQAGAKITIPSISNYIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNG-DIANQLNDAAAIETTWQRRVTPLATITNLTS--GGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSD-NIPWLRGYDYGGIGAVVNYMFIM-AYDWH---------HAGSEPGPVAPITEIRRTIEFTIAQVPSRKIIIGVPLYGYDWIIPYQPGTVASAISNQNAIERAMRYQAPIQYSAEYQSPFFRYSD-----------QQGRTHEVWFEDVRSMSRKMQIVREYRLQAIGAWQL-TLGFTPGPWLLRKFFTIRKV
4Q6T Chain:A ((4-340))--------------------------------------------------------------------------------------------APFVLAYTDGQVEASYSNLQAFHRNLSAVGLGSTYGLTVTGKLRQDGMN----ETTQNIIRFAKSQSLPLYPTVSDYNEDIGAFDPAISHSILNDRALSAGTVKQLVKLAKEGGFAGINLDFEKVEPRNRAAFCAFVKTLGNALHASNKKLIISIPPKLSDTEPEYLQGYDYKALGAAVDYFQ-VMTYDQVGPGWSSGGFHNEAWPGPESGFDWQQALLSYAVSRVPASKVLAGLPTYGQDYSIG-------NRVHWSAYQEIIAEHRAAIHRDAASATPYATWGPVKSFVDGVEWTPERAQPVLWYDDAASIKTKTALVTRLGLGGTSVW-AMGYENAGFWAALQSGLK----


General information:
TITO was launched using:
RESULT:

Template: 4Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1804 -174720 -96.85 -561.80
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -96.85
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_4Q6T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q6T-query.scw
PDB file : Tito_Scwrl_4Q6T.pdb: