Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNNSVQQANISIMSSFSGSKKVYVEGSSSDIQVPMREIALSPTTGSFGEEENAPVRVYDTSGPYTDPEVTINIQEGLKPLRQKWITER-GDVEEYEGRAIKPEDN--GYKKAK-PNVSYPGLKRKPLRAKAGQNVTQMHYAKKGIITPEMEFIAIREHVSPEFVRDEVASG---RAIIPSNINHPES-EPMIIGRNFHVKINANIGNSAVTSSIEEEVEKMTWAIRWGADTMMDLSTGKDIHTTREWIIRNCPVPVGTVPIYQALEKVNGVAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRTTGIVSRGGAIMAQWCLAHHQESFL-------------YTHFEEICEIMKMYDIAFSLGDGLRPGSIADANDEAQFA-------ELETLGELTQIAWKHDVQVMIEGPGHVPMHKIKENVDKQMDICKEAPFYTL-----GPLTTDIA--PGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNRDD-----VREGVITYKIAAHAADLAKGHPGAQIRDDALSK------ARFEFRWRDQFNLSLDPER-ALEYHDETLPAEGAKTAHFCSMC----GPKFCSMRISQDIRDYAKKNDLSEAEAINKGLKEKAKEFVDTGSNLYQ
4Q86 Chain:A ((2-583))-------------TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVP---NVW--SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENEL-------TGSMLID-LQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAES-----------ISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYD----GSLGGQYP------VICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAF------------


General information:
TITO was launched using:
RESULT:

Template: 4Q86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2740 -162925 -59.46 -306.83
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -59.46
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.149

(partial model without unconserved sides chains):
PDB file : Tito_4Q86.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q86-query.scw
PDB file : Tito_Scwrl_4Q86.pdb: