Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MKKTMSAITAAAAVTSCFTGFGAASFSAPAKAAAQTNTLSENTNQSAAELVKNLYNTAYKGEMPQQAQGL-TINKSTKGDVHAAFGEPERPVGGDNRFDLYHWNMGQPGYGFSYHKDMTI---SEIRYFGTGVERQLNLGG-------VTPEVLQKQLGPVNRVLTVPFTDEIDYVYDTGRYELHFVIGTDQTADHVNLKAK-------------------------
5D1R Chain:A ((13-239))AREQIEAKIVELGRRQLLDHGAAGLSLRAIARNLGMVSSAVYRYVSSRDELLTLLLVDAYSDLADTVDRARDDTVADSWSDDVIAIARAVRGWAVT-NPARWALLYGSPVPGYHAPPDRTAGVATRVVGAFFDAIAAGIATGDIRLTDDVAPQPMSSDFEKIRQEFGFPGDDRVVTKCFLLWAGVVGAISLEVFGQYGADMLTDPGVVFDAQTRLLVAVLAEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 5D1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 648 -64695 -99.84 -340.50
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -99.84
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.102

(partial model without unconserved sides chains):
PDB file : Tito_5D1R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D1R-query.scw
PDB file : Tito_Scwrl_5D1R.pdb: