Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTINIVAGGPKNLIPDLTGYTDEHTLWIGVDKGTVTLLDAGIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEKQPDIIQIFGITGGRADHFLGNIQLLYKGVK--TNIKIRLIDKQNHIQMFPPGEYDIEKDENKRYISFIPFSEDIHELTLTGFKYPLNNCHITLGSTLCISNELIHSRGTFSFAKGILIMIRSTD
3L8M Chain:A ((1-211))-MKANLLCGNRNLPKHILV--EHKHEHWIGIDRGTLILLESGITPQFAVGDFDSISDSERNFIQQ-QIEINPYN---DDTDLALGIDQAVKRGYRNIDVYGATGGRLDHFMGALQILEKPEYAKMNINIKLIDDTNEIQFIQKGQFNV-----FPYISFIPVI-P-TVISLKGFKYNLQNE-------LTISNEL---CGNIEIIEGSVLMIRSKD


General information:
TITO was launched using:
RESULT:

Template: 3L8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 961 -103215 -107.40 -543.24
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -107.40
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3L8M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L8M-query.scw
PDB file : Tito_Scwrl_3L8M.pdb: