Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRFLLNVILVLAIVLFLRYVHYSLEPEPSNQPDTYSNFSSLAENESPADYDISYNEKKGSKVLIMSPHGGRIEGGVSELVRYFNNE--YSTYLFEGLKSHDNQTLHITSTNFDEPLAKKKIKEHQYVVAFHGYKGEN-KNTLVGGTDRKRAKMIVRALERRGFSAELASSKSGLAGLNAENINNQGETGLSIQLEISREQREAFFDDF-YYKNRKYTKNSEFYAYVSAIKGVLEKEYS--
3A9L Chain:A ((4-210))--------------------------------TDTYPNIEALENAETVGVAYNIEVKRQNPSMIYFSPHAGGIEVGTTELIYRVVELTGGSLYLFQGLLPSGNSRLHVTSTHFDEPMAVCMLSKHTDAVSFHGYKDDYNKNTLVGGLNTELRNLIVSKLNSKGIAAEVATDR--FTATDPDNIVNRCASGKGVQLEISSAQRRAFFQNNDWSKANRGNVTQEFLDYAEAIKEAEAEYYGLE


General information:
TITO was launched using:
RESULT:

Template: 3A9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1147 -52336 -45.63 -260.38
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -45.63
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_3A9L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A9L-query.scw
PDB file : Tito_Scwrl_3A9L.pdb: