Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKALIFLSSLTAIGSSILGRWLGMLDDSYAVGDAW----FIGVLAGLISLLILIDSQTMTKNYIVSLSTILGILGVGFIY--------FPAAF----INILLSIT-----LDKQKKEDLHVR--------------------------------------------------------------
4WVM Chain:A ((4-703))DLVMPALGRPFTLGMLYDARREKLISSNAQRSSEFKIVASDSTESKSSAMDIEASLGVSFLGGLVEVGGSAKYLNNTKKYQNQSRVTLKYKATTVYKQFTHVVTSILYGANAFFVSDSDKVDIQGKMEAAIKKIPTISILTDEEKSLASNLSCKFHGDFLLESLPTTFEDAVKTYQTLPTNSVPMKVWLAPNVSKVRRIHTTLEELHKLKRRANEAMDVKLVQRIPLIHDKISNFQQIFQDYMLTVQKKIAEKLPLVREQSLQKIIDDRAQSPFSNEKVSKWLDAVEREIAVLKSCAGMVEGTQAKFVSNQTELDREVLVGKVKHAVCFIFTSVERNDPYLKVLSDYWESSTEDKWCFSTEVVLKMQQRAQTFCDHVNDFEKSRNVGFFITALENGKFQGASIYYYKEGSLATQDFTFPRMPFVQGYKKRSDLLWYACDLTFDRNTINNWISLSNDTFAASEHGKRQNYPKHPERFVSFNQVLCNEGLMGKHYWEVEWN-GYIDVGIAYISIPRKIDFASAFGYNTYSWVLSYNPKIGYIERHKKREYNVRAPNPGFKRLGLFLDWRYGSISFYAVSSDEVHHLHTFKTKFTEPVYPAFSIGPAGNHGTLRLL


General information:
TITO was launched using:
RESULT:

Template: 4WVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 295 -27028 -91.62 -270.28
target 2D structure prediction score : 0.17
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -91.62
2D Compatibility (Sec. Struct. Predict.) : 0.17
1D Compatibility (Hydrophobicity) : 0.55
QMean score : -0.034

(partial model without unconserved sides chains):
PDB file : Tito_4WVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WVM-query.scw
PDB file : Tito_Scwrl_4WVM.pdb: