Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------MIQGFYKDQKLHLLEDPMQQYTVMKVEENAVCV----YRWIDDYRHKIERFTDVEEAKKLLGEGWPKQ----------------------
2KK4 Chain:A ((1-95))QGHMDLICMYVFKGEESFGESIDVYGDYLIVKVGTEFLAVPKKSIKSVEDGRIVIGEFD--EEEARELGRKWLEEKSKPVTLEELKSYGFGEEGEGS


General information:
TITO was launched using:
RESULT:

Template: 2KK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 221 9619 43.52 155.14
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 43.52
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_2KK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KK4-query.scw
PDB file : Tito_Scwrl_2KK4.pdb: