Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------------------MNTYVVDDSKYKCIYAGTEKAAAFNNEFENGTRVRVWFEGHHIKTFEKEQREVCGVGEWIVKYDAATELQKEVNRLEKTYFKKKELLDTIRQADGVGREINEKKKSILNYSGC------------------------------------------------
1AER Chain:A ((1-211))AFLGDGGDVSFSTRGTQNWTVERLLQAHRQLEERGYVFVGYHGTFLEAAQSIVFGGVRAAIWRGFYIAGDPALAYGYAQDQEPDA-RGRIRNGALLRVYVPRSSLPGFYRTSLTL-----------AAPEAAGEVERLIGHPLPLR--LDAITGPEEEGG----RLETILGWPLAERTVVIPSAIPTDPRNVGGDLDPSSIPDKEQAISALPDYASQPGKPPR


General information:
TITO was launched using:
RESULT:

Template: 1AER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 285 8271 29.02 87.06
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 29.02
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.061

(partial model without unconserved sides chains):
PDB file : Tito_1AER.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AER-query.scw
PDB file : Tito_Scwrl_1AER.pdb: