Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLRPHLKIEAKGTGSVSFFSEDWLTAQQARTFARELGRFPYMKELEFEDEKGGSWTLKELEKLTEELAQEPDDITVYFDGSFDKESELAGLGIVIYYSLGGTRHRLRKNKSFRLKTNNEAEYAALYEAIREVRELGASRNSITIKGDSLVVLNQLDG-------SWPCYDPSHNEWLDKIEALLESLKLTPTYETIQRK----DNQEADGLAKKILSHQFVESHTKLDRNGDDDIG
3QIO Chain:A ((7-148))--------------------------------------------------------------------EPIVGAETFYVDGAANRETKLGKAGYVTNRGRQ-------KVVTLTDTTNQKTELQAIYLALQDSG------LEVNIVTDSQYALGIITQWIHNWKK--------NVDLVNQIIEQLIKKE-KVYLAWVPAHKGIGGNEQVDKLVSAGIRKV-----------------


General information:
TITO was launched using:
RESULT:

Template: 3QIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 574 -13914 -24.24 -116.92
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -24.24
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.403

(partial model without unconserved sides chains):
PDB file : Tito_3QIO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QIO-query.scw
PDB file : Tito_Scwrl_3QIO.pdb: