Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
1B4B Chain:B ((1-71))------------------------------------------------------------------------------ALVDVFIKLDGTGNLLVLRTLPGNAHAIGVLLDNLDWDEIVGTICGDDTCLIICRTPKDAKKVSNQLLSML


General information:
TITO was launched using:
RESULT:

Template: 1B4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 305 -66670 -218.59 -939.01
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -218.59
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_1B4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B4B-query.scw
PDB file : Tito_Scwrl_1B4B.pdb: