Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVTYQGIKNVVVKDVPDPKIEKSDD-----MIIKVTSTAICGSDLHLIHG-FIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQS--NDNGEMGAYFGYSGQTGGYPGGQAEYLRVPFANFTHFKI--PESCEEPDEKLSVIADAMTTGFWSVDNAGVKKGDTVIVLGCGPVGLFAQKFCWLKGAKRVIAVDYVNYRLQHAKRTNKVEIVNFE--DHENTGNYLKEIT----KGGADVVIDAVGMDGKMSDLEFLASGLKLHGGTMS---ALVIASQAVRKGGTIQITGVY-------------GGRYNGFPLGDIMQRNVNIRSGQAPVIHYMPYMFELVSTGKIDPGDVVSH--VLPLSEAKHGYDIFDSKMDDCIKVVLKP
2DPH Chain:B ((4-380))-KSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGA-FGFDLK--GWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGD------QNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVG---------FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLH-LDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFD-------------


General information:
TITO was launched using:
RESULT:

Template: 2DPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2117 -21913 -10.35 -63.89
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -10.35
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_2DPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DPH-query.scw
PDB file : Tito_Scwrl_2DPH.pdb: