Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTEKEMKQIQNEFKERMDE--GELLNCMRCGFCLPSCPTYIESGFQETHSPRGRIALMKAVADGMIEPDEDVERSLSLCLGCRACEPVCPSGVKYGQLLEEARDIIHQNKKHSLGERVMRKTAFHELFPHQNRMRSAVSLIGLYQRSGLQTAVRKSGMLRVLPEHLRTMEAVLPDVPKSKDMK-HRPRFLPSI-GPMKKRVAFFSGCLMDTMFLPTNNATLKLLQLAGCD----IVIPPEQACCGALHGHSGEKNTGKELAKQNIAAFEALDVDAVITNAGGCG-AFLTEYDHLLKDDP---EWSERAAAFVQKLKDFS-------------------SVLVELDFHQMDLALETPQVVTYQDSCHLRNVMHTSLEPRQLLKSI---------KGAEFKEMEKA--DSCCGSAGIYNIVEVEMSMKILDSKMAAVKATEAILIVTANPGCLLQMKLGIEREGLSGKVRAVHLADLLLEAAGHKTS--
4OFZ Chain:A ((85-513))-QTVDDFKNLMYKMQETRRAIVFALLN--------------------EKDLTKDDVEILKRAYEKLTDNFQR---------------EMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVDLFSILANYHPKG----------KETFLKEYEDTVKFLKTFISSEAITGKKPIFITDWDGTMKDYCSQYATNLQP------VYSAVGMTRFAASFTRISAVLTA-----GPLRGPG-------------ILDLTAMPIDGPVMFSGSWGREWWLSGKRVVHQDGITDEGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGDSLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG


General information:
TITO was launched using:
RESULT:

Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1833 31270 17.06 83.61
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 17.06
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.295

(partial model without unconserved sides chains):
PDB file : Tito_4OFZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OFZ-query.scw
PDB file : Tito_Scwrl_4OFZ.pdb: