Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNN-PVMVVGDAVIEESEGI-T-DRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
4CSW Chain:A ((16-235))------QLPETILGGLAPEEFLANYWQKRPLLIRQALP---GFR--SPIT-PEELAGLACEEGVTARLI-LEKGGAYPWEVRYGPFEPEDFVALPPTHWTLLVQEVDRLVPEVAALLETVRFVPNWRLD---DIMVSYAPEGGTVGAHIDNYDVFLVQAWGRRRWQINHRPVEREELVPGLE-----------V-----RLLAHFEPDAEWILEPGDVLYLPPRIPHYGVALEDCMTFSIGFRAPDQAELAE---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1154 -16624 -14.41 -76.61
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -14.41
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_4CSW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CSW-query.scw
PDB file : Tito_Scwrl_4CSW.pdb: