Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNNLKQRRIILDLAVTLDGFIEGKNGEVDWCIMD-PDMGFTDFLNQIDTILYGRKSFDLWGQYIPKN---------------------ED-PDTEKELWKLVHS-----KKKYVFSRTQNEID------------NQAIFIN----D-NILEEVNKLKKNPG-KDIWLYGGASLITTFINLGLVDEFRLSIHPVVLGEG-KPLFIDVK---QRINLKMVNTRTFSSGVVQIVYHWNG
2P4G Chain:A ((31-261))----INEPECRAIAITSINGSAT-LSGVSGPMGDQTDADLLIQLRGWADAIVVGAETARKENYGPVVLPHGIKNQRQKLGRCGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGVEVIVAPTSTNPLKIAFDALHA-RRLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICPVESPLFGKISDDSFTTRLVLEMLSSSPNGLIFSRYKVI-


General information:
TITO was launched using:
RESULT:

Template: 2P4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 821 -5151 -6.27 -28.46
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -6.27
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_2P4G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P4G-query.scw
PDB file : Tito_Scwrl_2P4G.pdb: