Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRTEKEKMAAGELYNSEDQQLLLERKHARQLIRQYNET-PEDDAVRTKLLKELLGSVGDQVTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARILKQL
1KRR Chain:C ((7-185))------ERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREI


General information:
TITO was launched using:
RESULT:

Template: 1KRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 899 -58174 -64.71 -326.82
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.82

3D Compatibility (PKB) : -64.71
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_1KRR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KRR-query.scw
PDB file : Tito_Scwrl_1KRR.pdb: