Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAATTRVGLTDLTFRLLRESFADAVSWVAKNLPARPAVPVLSGVLLTGSDNGLTISGFDYEVSAEAQVGAEIVSPGSVLVSGRLLSDITRALPNKPVDVHVEGNRVALTCGNARFSLPTMPVEDYPTLPTLPEETGLLPAELFAEAISQVAIAAGRDDTLPMLTGIRVEILGETVVLAATDRFRLAVRELKWSASSPDIEAAVLVPAKTLAEAAKAGIGGSDVRLSLGTGPGVGKDGLLGISGNGKRSTTRLLDAEFPKFRQLLPTEHTAVATMDVAELIEAIKLVALVADR--GAQVRMEFADGSVRLSA-GADDVGRAEEDLVVDYAG--EPLTIAFNPTYLTDGLSSLRSERVSFGFTTAGKPALLRPVSGDDRPVAGLNGNGPFPAVSTDYVYLLMPVRLPG
4TRT Chain:A ((1-361))-----------VMKANVTKKTLNEGLGLLERVIPSRSSNPLLTALKVETSEGGLTLSGTNLEIDLSCFVPAEVQQPENFVVPAHLFAQIVRNLGGELVELELSGQELSVRSGGSDFKLQTGDIEAYPPLSFPAQADVSLDGGELSRAFSSVRYAASNEAFQAVFRGIKLEHHGESARVVASDGYRVAIRDFPASG----DGKNLIIPARSVDELIRVLKD-GEARFTYG-------DGMLTVTTDRVKMNLKLLDGDFPDYERVIPKDIKLQVTLPATALKEAVNRVAVLADKNANNRVEFLVSEGTLRLAAEG-DY-GRAQDTLSVTQGGTEQAMSLAFNARHVLDALGPIDG-DAELLFSGSTSPAIFRAVGG-----------------GGGYMAVMVTLR---


General information:
TITO was launched using:
RESULT:

Template: 4TRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -272786 for 2932 contacts (-93.0/contact) +
2D Compatibility (PS) -38520 + (NN) -13924 + (LL) 216
1D Compatibility (HY) -25600 + (ID) 4750
Total energy: -355364.0 ( -121.20 by residue)
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_4TRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TRT-query.scw
PDB file : Tito_Scwrl_4TRT.pdb: