Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADCDSVTNSPLATATATLHTNRGD-----IKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFD-KPY---LLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRP-TDPVVIESITIS
2ESL Chain:E ((12-174))
----------PSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG------------YKGSKFHRVIKDFMIQGGDIT-TGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMT--VVHSIELQATDGHDRPLTNCSIINS----
General information:
TITO was launched using:
RESULT:
Template:
2ESL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64577 for 1198 contacts (-53.9/contact) +
2D Compatibility (PS) -16528 + (NN) -13047 + (LL) 360
1D Compatibility (HY) -13200 + (ID) 4100
Total energy: -111092.0 ( -92.73 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2ESL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ESL-query.scw
PDB file :
Tito_Scwrl_2ESL.pdb
: