Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKH---ALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSNTDGQVIAVYRLRAS-RAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
3EBT Chain:A ((2-131))
--MSNNMQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIA-EMRLAPDEFIESG-ERIVVLGTRRVTAVNGRSATLKFVHVWRFENGRAVTFEDHFDTAEMIRLIT-
General information:
TITO was launched using:
RESULT:
Template:
3EBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61447 for 869 contacts (-70.7/contact) +
2D Compatibility (PS) -13449 + (NN) -3769 + (LL) 156
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -83659.0 ( -96.27 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_3EBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EBT-query.scw
PDB file :
Tito_Scwrl_3EBT.pdb
: