Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYRNPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARLGKL---------NPPPTR-DIPVLIGGGGERKTLRLVAEYADIWHSFT-AGDSYLAKSAVLSTHCSTVGRNPATIERSAAVDGGGLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR
1F07 Chain:A ((1-205))
----------MKFGIEFVPN--EPIEKIVKLVKLAEDVGFEYAWITDHYN---------NKNVYETLALIAEGTETIKLGPGVTNPYVRSPAITASAIATLDELSNGRATLGIGPGD-KATFDALGIEWV---KPVSTIRDAIAMMRTLLAGEKTESGAQLMGVKAVQEKIPIYMGAQGPM-MLKTAGEISDGALINASNPKDFEAAVPLIKEGAEAAGKSIADIDVAAYT--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1F07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123461 for 1601 contacts (-77.1/contact) +
2D Compatibility (PS) -21305 + (NN) -11162 + (LL) 2100
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -164928.0 ( -103.02 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_1F07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F07-query.scw
PDB file :
Tito_Scwrl_1F07.pdb
: