Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVILLPMVTFTMAYLIVDVPKPGDIRTNQVSTILASDGSEIAKIVPPEGNRVDVNLSQVPMHVRQAVIAAEDRNFYSNPGFSFTGFARAVKNNLFGGDLQGGSTITQQYVKNALVGSAQHGWSGLMRKAKELVIATKMSGEWSKDDVLQAYLNIIYFGRGAYGISAASKAYFDKPVEQLTVAEGALLAALIRRPSTLDPAVDPEGAHARWNWVLDGMVETKALSPNDRAAQVFPETVPPD--L-AR-A----ENQTKGPNGLIERQVTRELLELFNIDE---QTLNTQGLVVTTTIDPQAQRAAEKAVAKYLDGQDPDMRAAVVSIDPHNGAVRAYYGGDNA---NGFDFAQAGLQTGSSFKVFA-LVAALEQG-IGLGYQVDSS-PLTVDGIKITNVEGEGCGTCNIAEALKMSLNTSYYRLMLKLNG----GPQAVADAAHQAGIASSFPGVAHTLSEDGKGGPPNNGIVLGQ--YQTRVIDMASAYATLAASGIYHPPHFVQKVVSANGQVLFDASTADNTGDQRIPKAVADNVTAAMEPIAG-YSRGHNL-AGGRDSAAKTGTTQFGDT---------TANKDAWMVGYTPSLSTAVWVGTVKGDEPLVTASGAAIYGSGLPSDIWKATMDGALKGTSNETFPKPTEVGGYAGVPPPPPPPEVPPSETVIQPTVEIAPGITIPIGPPTTITLAPPPPAPPAATPTPPP |
2OLV Chain:A ((13-612)) | --------------------------DPIPAKIYDKNGELVKTLDN-GQRHEHVNLKDVPKSMKDAVLATEDNRFYEHGALDYKRLFGAIGK--------GASTLTQQVVKDAFLSQHK----SIGRKAQEAYLSYRLEQEYSKDDIFQVYLNKIYYSDGVTGIKAAAKYYFNKDLKDLNLAEEAYLAGLPQVPNNYNIYDHPKAAEDRKNTVLYLMHYHKRITDKQWEDAKKI-DLKANLVNRTPEERQNIDTNQDSEYNSYVNFVKSELMNNKAFKDENLGNVLQSGIKIYTNMDKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENMKWATNHAIQDESSYQVDGSTFRNYDTKSHGTVSIYDALRQSFNIPALKAWQS--VKQNAGNDAPKKFAAKLGLNYEGD--------------IGPSEVLGGSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYD----HTSHKAMSDYTAYMLAEMLKGTFKPYGSAYGHGVSGVNMGAKTGTGTYGAETYSQYNLPDNAAKDVWINGFTPQYTMSVWMGFSKV-KQYGENSFVGHSQQEYPQFLYENVMSKISSR-DGEDFKRPSSVS----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185978 for 4723 contacts (-39.4/contact) +
2D Compatibility (PS) -60918 + (NN) -34988 + (LL) 2396
1D Compatibility (HY) -19600 + (ID) 7300
Total energy: -306388.0 ( -64.87 by residue)
QMean score : 0.505
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