Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAA-----RNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGA---AQA----AGAMPVLTLYGIPHRDCGSYASGGF-----ATGTDYRGWIDAVASG---LGSSPATIIVEPDALAMADC------LSPDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSA--------EAMAARLNDVGV-GRARGFSLNVSNFYTT--------------DEEIGYGEAISGL----TNGSHYVIDTSRNGAGPAPD-APLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTC-----------GR-----GEPQAGRFVSQYAIDLAHNAGQ |
| 1OC7 Chain:A ((3-362)) | -------------------------------------------------------------------------------------YNGNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVD---TLLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSG-AASTYRELTIYALKQLD-LPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECNGTSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56166 for 2412 contacts (-23.3/contact) +
2D Compatibility (PS) -31296 + (NN) -13992 + (LL) 7256
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -112798.0 ( -46.77 by residue)
QMean score : 0.404
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