Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKE---SISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPYL--IDNRYPHSPRLIEYTWQL--R-----HNVTFYDALYVALATALDVPLLTGD-SRLAAAPGLPCEIKLVR
2H1C Chain:A ((1-130))
--MILLDTNVISEPLRPQPN--ERVVAWLDSLILEDVYLSAITVAELRLGVALLLNG--KKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAAADGYIAATAKQHSLTVATRDTGSFFAAD----------
General information:
TITO was launched using:
RESULT:
Template:
2H1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57506 for 779 contacts (-73.8/contact) +
2D Compatibility (PS) -12813 + (NN) -4652 + (LL) 1036
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -77085.0 ( -98.95 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_2H1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H1C-query.scw
PDB file :
Tito_Scwrl_2H1C.pdb
: