Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQWCPRPWP----DRPRRRLTTP-AEALVTRR---KPVVLRRATPLQAIAAMDAMDYDVHLFT---------------DAETGE----DAVVYRAGPSGLRLARQH-----HVFPPG---WSRCRA-PAGPPVPLIV-------------NSRPTPVLTEAAAVDRAREHGLPFLFFTDQA-TGRGQLLYSRYDGN-------LGLITPTGDGVADGLA-------------------------- |
| 5CXB Chain:B ((1-369)) | PSPDELKPFPTVQQTIF----RGHEGRVRSVAIDPTGVALATGGDD-----GTVRVWELLTGRQVWSVKL-NGDEAVNTVRWR-PTKDTFILAAAAGEDIFLMIPTHPSVTPALDQASRDILNAGFPPGKWARPGTRLEDEGVLLRITVRSTIKAISWHRRGDHFATVSPSGQRSSVAIHTLSKHLTQIPFRKLNGLAQTASFHPLRPLFFVATQRSIRCYDLQKLELVKIVQPGAKWISSFDVHPGGDNLVVGSYDKRLLWHDLDLSNRPYKTMRFHTEAIRAVRFHKGGLPLFADASDDGSLQIFHGKVPNDQLENPTIVPVKMLKGHKVVNKLGVLDIDWHPREPWCVSAGADGTARLWM |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15893 for 1886 contacts (-8.4/contact) +
2D Compatibility (PS) -28255 + (NN) -12290 + (LL) 1240
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -67498.0 ( -35.79 by residue)
QMean score : 0.281
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