Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVM----LVVIGIVGTLATAASIGYID-------TELAHGHI---DGRSARLYGVLTP------------AFLCAMVLAVCANNIGVIWVAIEATTVITAFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGLDPGVARLAGGLLLIGYGAKAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLIRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSME--HMGLIAIAAAAGTTLAIAALL-----LHVLAHGIG---KTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPATAAAAL-MVGIVVSAALGITAGPLADLLGIAASNVGLP |
| 4OJD Chain:H ((14-490)) | ------------------RAEPPHCSKTPIVRAQTSQNAMGMQMQFSIGLHTAVCFRLYSLLHTIRLEKLEHHHPITQRYTFGIPEVHASCICECDATSSTCTAESHQFTACPEDETSSCYRTFFPNQTPIGCSEDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVY------AAYDFVNGYWVEKDKTKIRSQLDG-----GTQDRHLDQKRRISLAVTAGARAS-----------------------HQLETGMYFSRTSNGGETEELRMQPLNEITDNNFDRLGWYRMDDSGHFHVNNG--VVKMEEIHKAKVKNCKEQTYKSILSANHYMPGHFNLTRPLEVIKPWIQSARIFDSSLRQAVVTHAEGTNLQISIHLESQNLVFFHNASRIRDFSGSIIVDSKSNRLFNLTVYEASGKIDGSVKMST-GFGSDTIHTFTAYVSD---------LHASNRSMIIPLPAIVGQGARAICLRADSMADIDKICHVIE----YFESPLF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -375931 for 3015 contacts (-124.7/contact) +
2D Compatibility (PS) -41816 + (NN) 22909 + (LL) 6660
1D Compatibility (HY) -5200 + (ID) 3650
Total energy: -397028.0 ( -131.68 by residue)
QMean score : -0.001
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