Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MRDRILAAVCDVLYIDEADLIDGDETDLRDLGLDSVRFVLLMKQLGVNRQSELPSRLAAN-PSIAGWLRELEAVCTEFG
2JU2 Chain:A ((1-95))
GSHMLRDRLAGLPRAERTAELVRLVRTSTATVLGHDDPKAVRATTP-FKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAELG---
General information:
TITO was launched using:
RESULT:
Template:
2JU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52060 for 533 contacts (-97.7/contact) +
2D Compatibility (PS) -8029 + (NN) -6772 + (LL) -12
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -69323.0 ( -130.06 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_2JU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JU2-query.scw
PDB file :
Tito_Scwrl_2JU2.pdb
: