Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MAGSVSAAAGIGWVGLNVTETNRDQCYRVERTTVDALTHPEYRVHTRGVQRVRVTRNARKHRVSKHRIVAAMRHCGVPVIQEDGSLYYQGRDTSGRLTEVVAVEADDGDLIITHAMPKEWKR
3FAC Chain:A ((1-109))
MKGTCHCGAVEIEVELLNGFADARRCDCSFCRRRGAIAA-TARLSDLRVVRG---AENLTLYQFGTRTAKHWFC---RTCGIYTHHQRRS------NPEEYGVNVAILEGVNPRDLGEVPWT-----
General information:
TITO was launched using:
RESULT:
Template:
3FAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9695 for 710 contacts (-13.7/contact) +
2D Compatibility (PS) -10476 + (NN) 1963 + (LL) 1456
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -16352.0 ( -23.03 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_3FAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FAC-query.scw
PDB file :
Tito_Scwrl_3FAC.pdb
: