Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGN-YR--------------ERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAM--PPPIFVAASGPQSATLAGRYGDGWIAQARDI-NDAKLLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAVD-------------QPNPVEIQRA--------AESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFPQ--DDPITAIDFYRTNVLPELR |
| 1EZW Chain:A ((3-348)) | ----------------------------------------EVSFGIELLPD-DKPTKIAHLIKVAEDNGFEYAWICDHYN--------NYSYMGVLTLAAVITSKIKLGPGITNPYT-RHPLITASNIATLDWISGGRAIIGMGPGD-KATFD---KMGLPFPCKIPIWNPEAEDEVGPATAIREVKEVIYQYLEGGPVEYEGKYVKTGTADVKARSIQGSDIPFYMGAQGPIMLKTAGEIANGVLVNASNPKDFEVAVPKIEEGAKEAGRSLDEIDVAAYTCFSIDKDEDKAIEATKI-VVAFIVMGSPDVVLERHGIDTEKAEQIAEAIGKGDFGTAIGLVDEDMIEAFSIAGDPDTVVDKIEELLKAGVTQVVVGSPIGPDKEKAIELVGQEVIPHFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172603 for 2680 contacts (-64.4/contact) +
2D Compatibility (PS) -33772 + (NN) -24458 + (LL) 632
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -247301.0 ( -92.28 by residue)
QMean score : 0.534
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