Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPFDDPQAELAWMFL-QSLCEGGDLDEGFALLSNDFT-YWSIVT---RTELDKKTFRRAVERRKQVF-EVNIELIRCVNEGETVVVEGHCDGVS--------ADRTRYDSPFVCIFETRDGMIISLREYSDTQSLAEVYPVACATPGRC
3F9S Chain:A ((1-143))
GMSISSKAKEILTQFTREVWSE-GNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDIQGLFADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFDGNRLTGHWQITDRLGVYQQLRQAA------
General information:
TITO was launched using:
RESULT:
Template:
3F9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48155 for 913 contacts (-52.7/contact) +
2D Compatibility (PS) -13812 + (NN) -5502 + (LL) -132
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -70751.0 ( -77.49 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3F9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9S-query.scw
PDB file :
Tito_Scwrl_3F9S.pdb
: