Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDATPNAVELTVDNAWFIAE-TIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHR-PPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFS-GPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSA-GRVLVSPSRAFDG-EWVSTFSPGTPFAIA-VAIQTLTACLPDGQWFPGQRVSRDFSTQSS----- |
| 4PX7 Chain:A ((1-258)) | ---GRSIARRTAVGAALLLVMPVAVWISGW----------RWQPGSWLLKAAFWVTET-VTQPWGVITHLILFGWFLWCLRFR-----------IKAAFVLFAILAAAILVGQGVKSWIKDKV----------------QEPRPFVIWLEKT--HHMPVDKFYTLK-RAERGNLVKEQLAE--PQYLRSHWQKETGFAFP---SGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMG------SRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPEENREIAQREQESLEHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23226 for 1709 contacts (-13.6/contact) +
2D Compatibility (PS) -24738 + (NN) -3541 + (LL) 4924
1D Compatibility (HY) -6400 + (ID) 2500
Total energy: -55481.0 ( -32.46 by residue)
QMean score : 0.129
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