Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRLRGAVAGLGDPELMRQAWR
2BSQ Chain:E ((2-69))
-ASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQTVRLGSMLASIGQEIGGVELEDVRG----
General information:
TITO was launched using:
RESULT:
Template:
2BSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12372 for 273 contacts (-45.3/contact) +
2D Compatibility (PS) -7593 + (NN) -3515 + (LL) 728
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -24552.0 ( -89.93 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2BSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BSQ-query.scw
PDB file :
Tito_Scwrl_2BSQ.pdb
: