Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVDRSFDGTLGLSLLWVLRGWRRPDDVRVRPTA-ASLPGVEMVTATVAHIDIAAQVVHTD--N---SVIGYDALVIALGAALNTDAVPGLSDALDADVAGQFYTLDGAAELRAKVEALEHGRIAVAIAGVP-------------------FKCPAAPFEAAFLIAAQLGDRYATGTVQIDTFTPDPLPMPVAGPEVGEALVSMLKDHGVGFHPRKALARVDEAARTMHFGDGTSEPFDLLAVVPPHVPSAAARSAG--L-SESGWIPVDPRTLS-TSADNVWAIGDATVLTLPNGKPLPKAAVFAEAQAAVVAHGVARHLGYDVAERHFTGTGACYVETGD-HQAAKGDGDFFAPSAPSVTLYPPSREFHEEKVAQELAWLTRWKT |
3H8L Chain:A ((2-357)) | --TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKY-G----YSVCEPEFATKLREKLESFQGGNIAI-GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIRE--HEIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDL-NMVSIKYDNVYAVGDANSMTV------PKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYPTIVCVADNPYE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233729 for 2721 contacts (-85.9/contact) +
2D Compatibility (PS) -35750 + (NN) -13878 + (LL) 3852
1D Compatibility (HY) -20000 + (ID) 4000
Total energy: -303505.0 ( -111.54 by residue)
QMean score : 0.492
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