Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
4QFE Chain:H ((8-234))
--EPVRIERNGPVTTVIIDRPEARNAVNGPTAAALFAAFEEFDADDTASVAVLTGANGTFCAGADLKAFGTPEANQVHREGPGPMGPSRMDLSKPVIAAISGYAVAGGLELALWCDLRVVDEDATMGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRAVDAAEAYAIGLANRVVPTGQARQAAEELAADLARLPQQCMRADRLSALHQWGESENAAMDFEFASI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140132 for 1946 contacts (-72.0/contact) +
2D Compatibility (PS) -25454 + (NN) -15214 + (LL) 1936
1D Compatibility (HY) -25200 + (ID) 9400
Total energy: -213464.0 ( -109.69 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4QFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QFE-query.scw
PDB file :
Tito_Scwrl_4QFE.pdb
: