Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARVSGAAAAEAALMRALYDEHAAVLWRYALRLTGDAAQAEDVVQETLLRAWQHPEVIGDTARPARAWLFTVARNMIIDERRSARFRNVVGSTDQSGTPEQSTPDEVNAALDRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQELGVTR
4NQW Chain:A ((30-202))
-ALLRRVA-HDQAAFAEFYDHTKSRVYGLVMRVLRDTGYSEETTQEIYLEVWRNASEFDSAKGSALAWLLTMAHRRAVDRVRCE------------------------AGDERRRVTECLKALTDTQRQCIELAYYGGLTYVEVSRRLAANLSTIKSRMRDALRSLRNCLD------
General information:
TITO was launched using:
RESULT:
Template:
4NQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80679 for 970 contacts (-83.2/contact) +
2D Compatibility (PS) -16387 + (NN) -13722 + (LL) 1296
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -119442.0 ( -123.14 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_4NQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NQW-query.scw
PDB file :
Tito_Scwrl_4NQW.pdb
: