Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDA--RSALRALLDAMITPTRAEDGCRSYDLYESA--------DG-GELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
1TUV Chain:A ((1-103))
---MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLE-MNIRILQPG-----
General information:
TITO was launched using:
RESULT:
Template:
1TUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50488 for 599 contacts (-84.3/contact) +
2D Compatibility (PS) -10139 + (NN) -3531 + (LL) 380
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -72078.0 ( -120.33 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_1TUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TUV-query.scw
PDB file :
Tito_Scwrl_1TUV.pdb
: