Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSASEQRVTLTNADKVLYPATGTTKSDIFDYYAGVAEVMLGHIAGRPATRKRWPNGVDQPAFFEKQLALSAPPWLSRATVAHRSGTTTYPII-DSATGLAWIAQQAALEVHVPQWRF--VAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVARAVRDLLADIGLVTFPVTSGSKGLHLYTPLDEPVSSRGATVLAKRVAQRLEQAMPALVTSTMTKSLRAGKVFVDWSQNSGSKTTIAPYSLRGRTHPTVAAPRTWAELDDPALRQ-LSYDEVLTRIARDGDLLERLDADAPVADRLTRYRRMRDASKTPEPIPTAKPVTGDGNTFVIQEHHARRPHYDFRLECDGVLVSWAVPKNLPDNTSVNHLAIHTEDHPLEYATFEGAIPSGEYGAGKVIIWDSGTYDTEKFHDDPHTGEVIVNLHGGRISGRYALIRTNGDRWLAHRLKNQKDQKVFEFDNLAPMLATHGTVAGLKASQWAFEGKWDGYRLLVEADHGAVRLRSRSGRDVTAEYPQLRALAEDLADHHVVLDGEAVVLDSSGVPSFSQMQNRGRDTRVEFWAFDLLYLDGRALLGTRYQDRRKLLETLANATSLTVPELLPGDGAQAFACSRKHGWEGVIAKRRDSRYQPGRRCASWVKDKHWNTQEVVIGGWRAGEGGRSSGVGSLLMGIPGPGGLQFAGRVGTGLSERELANLKEMLAPLHTDESPFDVPLPARDAKGITYVKPALVAEVRYSEWTPEGRLRQSSWRGLRPDKKPSEVVRE |
5DMU Chain:A ((20-294)) | --------IKVTNPDKVLFPEDGITKGELVDYYRRISGVMVPLVRGRPMTMQRFPDGIGKEGFFQKEASDYFPDWVHRATLELGKGGIQHQVVCDDAATLVYLASQAMITPHVFLSRIDKVHYP----------DRLIFDLDPPDN-NFETVRSAAKTIREALDAEGYPVYLMTTGSRGLHVVVPLDRSADFDTVRAFARGFGEKLTKKYPDRFTIELSKEKRRGRLFLDYLRNSYGQTGVAPYGVRARSGAPVATPITWDELDDISGSQEYNIRNIMGRMDKRGDAWKYIDKD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5DMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -92435 for 2193 contacts (-42.2/contact) +
2D Compatibility (PS) -28914 + (NN) -9538 + (LL) 25476
1D Compatibility (HY) -20800 + (ID) 4700
Total energy: -130911.0 ( -59.69 by residue)
QMean score : 0.377
|
|
|