Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAA--EIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
1RC0 Chain:B ((1-186))
------------ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVAS-------------------
General information:
TITO was launched using:
RESULT:
Template:
1RC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131850 for 1489 contacts (-88.5/contact) +
2D Compatibility (PS) -20942 + (NN) -13718 + (LL) 1608
1D Compatibility (HY) -11200 + (ID) 3450
Total energy: -179552.0 ( -120.59 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_1RC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RC0-query.scw
PDB file :
Tito_Scwrl_1RC0.pdb
: