Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCV-----------DVMKQISAVQSSLERANRVMLHNHLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM---------
1G5T Chain:A ((27-183))
ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWETQNREADTAACMAVWQHGKRMLADPL----LDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRPVKHA
General information:
TITO was launched using:
RESULT:
Template:
1G5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36513 for 805 contacts (-45.4/contact) +
2D Compatibility (PS) -11867 + (NN) 1238 + (LL) 388
1D Compatibility (HY) -800 + (ID) 500
Total energy: -48054.0 ( -59.69 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1G5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5T-query.scw
PDB file :
Tito_Scwrl_1G5T.pdb
: