Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTCTLGEEGEVIGDRWAQLTADHADQLGGYRIGELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVTYDPN-----GGYGHPDHVHTHTVTTAAVAAAGVGSGTADHPGDPWTVPKFYWTVLGLSALISGARALVPDDLRPEWVLPRADEIAFGYSDDGIDAVVEADEQARAAKVAALAAHATQVVVGPTGRAAALSNNLALPILADEHYVLAGGSAGARDERGWETDLLAGLGFTASGT |
5BMO Chain:A ((14-210)) | --DFSRVLAIVAHPDDIEFGAGPAVAQWTAQGREVAYLLVTRGEAGISDL---------EPAQCGPVREAEQRKAAAELGVHEVDFLDH---YNDGTIEY-------------GPGLRRDLARAVRRHRPELIVTFNHHDTWASGAWNTPDHRAVGLAALDAVADAAN---------------RWIFPELLDEGL-------------EPWRAGK---VA-IAGSPHATHAVAVDDDSRDRAVRSLAAHDRYLGSL---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5BMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96475 for 1621 contacts (-59.5/contact) +
2D Compatibility (PS) -21339 + (NN) -12340 + (LL) 4728
1D Compatibility (HY) -5200 + (ID) 2600
Total energy: -133226.0 ( -82.19 by residue)
QMean score : 0.404
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